CDS

Accession Number TCMCG016C06702
gbkey CDS
Protein Id OMO91069.1
Location complement(join(42715..42905,43181..43355,43644..43742,44619..44765,44849..45017,45366..45517,46815..46885,46977..47160,47250..47441,47543..47699,48474..48537,48630..48720,48865..48995,49083..49170,50016..50217,50329..50465,51173..51272,51393..51589,52543..52687,52913..53034,53126..53371,55080..55255,55348..55465,55590..55668,55783..55862,56891..56962,57049..57084,57215..57244))
Organism Corchorus capsularis
locus_tag CCACVL1_07228

Protein

Length 1216aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01008366.1
Definition RecF/RecN/SMC [Corchorus capsularis]
Locus_tag CCACVL1_07228

EGGNOG-MAPPER Annotation

COG_category D
Description Structural maintenance of chromosomes protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00535        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K06669        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04110        [VIEW IN KEGG]
ko04111        [VIEW IN KEGG]
ko04113        [VIEW IN KEGG]
ko04114        [VIEW IN KEGG]
map04110        [VIEW IN KEGG]
map04111        [VIEW IN KEGG]
map04113        [VIEW IN KEGG]
map04114        [VIEW IN KEGG]
GOs GO:0000785        [VIEW IN EMBL-EBI]
GO:0000793        [VIEW IN EMBL-EBI]
GO:0000819        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004672        [VIEW IN EMBL-EBI]
GO:0004674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005819        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006468        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007059        [VIEW IN EMBL-EBI]
GO:0007062        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008278        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0015630        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016301        [VIEW IN EMBL-EBI]
GO:0016310        [VIEW IN EMBL-EBI]
GO:0016363        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016772        [VIEW IN EMBL-EBI]
GO:0016773        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034399        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0060147        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060966        [VIEW IN EMBL-EBI]
GO:0060968        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0098813        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1900368        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGATCTGGGAAATCAAACTTTTTCCATGCACCTGCAGCCTGAACATCGGCATGCGCTATTACATGAAGGTGCTGGACACCAGGTTTTATCTGCATTTGTGGAGATTGTTTTTGATAATTTTGACAATCGTATCCCGGTTGACAAGGAGGAGGTACGCCTTCGTCGGACAATTGGGTTTAAGAAGGATGACTACTATTTGGATGGAAAACATATTACGAAAACAGAAGTTATGAATTTACTGGAAAGTGCTGGTTTCTCTCGTTCTAATCCTTATTATGTTGTGCAACAAGGAAAGATAGCATCACTAACACTGATGAAAGATTCTGAGAGGCTGGACTTACTGAAAGAAATTGGTGGTACTCGTGTTTATGAAGAGAGACGCCGTGAAAGCTTGAAAATCATGCAGGAAACTGGCAATAAAAGGAAGCAAATAATACAAGTTGTTCAGTACTTAGATGAGAGATTAAAAGAACTGGATGAAGAGAAAGAAGAGCTTAGAAAATATCAGCAGCTTGACAAGCAGAGAAAAGCACTAGAGTACACCATTTATGATAAAGAACTTCAAGATGCTAGGCATAAATTGGAAGAGGTAGAAGAACAGCGAACAAAGATTTCTGAAGAATCAGCTGGTATGTATAATGCTGTGCTGGATTCCCATGAAAGGTTCAAGGAAATAGAGAAGATGTCTAAAGATCTAACAAAGGAGCTTCAAAGTTTAAACAAAGATAAAGAAGCCTTAGAAATGCAACAAGCAAAAGCTTTGAAGAAGCAGACTGCACTTGAGCTTGATGTAAAAGATCTAGAAGAGAAGATGTCTGGGAACATGCAAGCCAGAGATGATGCAGTCAAGCAGCTTCGTCTGCTGGAGAAGGAAATACAGGACTCAACAGAGGAGCGTAACCAGATTAAACCCAAGTATGATAGCCAAGTAAAACAGGAGGAGACAATAACAAAAGGGATCATGGAGCGTGAAAAGCAGCTGAGCATTCTTTATCAGAAACAAGGTCGTGCTACTCAGTTTTCGAGCAAAGCTGCTCGTGATAGATGGCTTGATAAGGAAATTTCTGATCTGAAGCGAGTGCTTCAATCAAACTTGATTCAGATAGCAGCTAACTACTACTGTATTTTTCAGGAGCAAAAACTCCAGGAGGAAATTGGTCGGCTTCATAAGGACTTGGAGGAGCAGGATGCTTCTATTGAAATACACAAAACTGAAATAATAGAGTTAGAATCTTCAATATCTCAGTCCCGAATCAGCTCTCAAAAAGCAGAAAGAGACAAGCTGCAGGAGGAAAGGAAGTCCTTATGGGACAAGGAGAGTAAAATTTCAGCTGAAATTGATAAGCTGAAAGCAGAACTCGAGAAAGCAGAGAAGAGCCTTGACCATGCAACTCCTGGAGATGTAAGGAGAGGGCTGAATTCTGTTCGGAGGATCTGCAAAGAATACAAATATGGAGGTGTGTTTGGTCCAATTATTGAGCTGCTTAGTTGTGATGATAAGTTTTTTACTTCCGTTGAAGTAACTGCTGGAAACAGTTTATTCCATGTTGTTGTTGAAAGTGATGATGTTTCGACAAAGATAATTCGACATCTTAATTCAATGAAAGGTGGACGTGTTACTTTTATACCACTTAACCGCGTGAAGGCTCCTCATGTTACGTACCCACAAAGTTCTGATGTAATACCTCTATTAAGGAAACTAAACTTTTCTCCAAAATTTGCTCCAGCATTTGCACAGGTGTTTGGTAGAACAGTGATCTGCCGAGATATAGATGTTGCTACAAGAGTTGCTCGGACTGATGGTCTGGACTGCATAACTTTGGAAGGTGATCAAGTTAGCAAGAAGGGTGGTATGACTGGGGGGTATTATGATCCTAGGCGCTCAAGATTGAAGTTCATGAATATAATTACACAAAACAGTCTGGCTAGGGAGGAGAAGGAACAAGAACTGAATAGATTAACAGTAACAAGTTCCAGTGTATCAGGGATTTGGGAAAAGAACTTGTTAGACATAGAGTTTTCCGCAATTTCTTTTTTAAAACTTCGAAATCTGCCATTAGTTAGAGAGATTGAAGTTGAACATAGAACAACATTGGTAGATGTGAAGGGTAGCTCACGGTTAGAACAGAAAATCACAGCTTTGGTCACTGAACAGCAGCAACTTGATGCTAAGCGGGTTCTTGACAAATCATTGTTGGAACAGCATAAGCTGGACATTGCTAACTTCAATAAGCAAAAGCAACATATATCTAAAGCTCTTGAAAATAAGGAAAAGTCACTTGCAGATGTTCGGACGCAAATTGATCAACTTAAAGCTAGTATGGCCATGAAAGAGGCTGAAATGGGCACCGAGCTTATTGATCACTTAACACCTGAAGAAAAGGACCTTCTTTCGAGATTAAACCCTGAAATAGCAGATCTTAAGGAGCAGCTCATCAAATGCAGGAGTGACCGCTTTGAGATTGAAACAAGAAAAGCTGAACTTGAGACTAATCTGACGACCAACCTTAAGAGGCGGAAGCAAGAGTTGGAAGGAATGATATCTGCAGCAGAGGCTGATGCATCACTTGATGAAGCTGATATGAAGAGACAGGAGCTAAGGGACGCTAAATTATTGGTTGAAGATGCAACACAGCAGCTTAAAAGAGTCTGTGATGCAATTGATGAGCGAACAAAGCAGCTTAAGGAATTGAAGGACGAAAAGAACAAACTAAAGGACTTGGAAGATAACTATGAGAGGCGACTTCAGGATGACGCAAAAGGGTTGGAACAACTACTAAGTAAAAGGAGCAATCTTCTTGCTAAGCAGGAAGAGTACTCAAAGAAAATAAGGGAACTGGGTCCTTTGTCATCGGATGCTTTTGAAACGTATAAGCGAAAGCATGTGAAAGAGTTGCTGAAAATGCTTCATAAGTGCAATGAGCAGCTGCAAAAGTTCAGCCATGTAAACAAGAAGGCACTTGACCAGTACATAAATTTCACAGAGCAAAGAGAAGAACTGCAAAGAAGGCAGGCTGAGCTGGATGCTGGGGATGAGAAAATTAAAGAACTCATTGCAGTTCTAGATCAGCGGAAGGATGAATCAATAGAACGCACTTTCAAAGGAGTTGCCCGGCACTTTCGAGAAGTATTCTCTGAACTGGTGCAAGGTGGTCATGGTCATTTGGTGATGATGAAAAAAAAGGATGGCGATCATGCAGCTGATGATGACCAAGATGATGATGAACCTCGTGAGGCGGATGCGGAGGGAAGAGTTGAGAAATACATTGGTGTAAAAGTGAAGGTTTCTTTTACTGGGCAAGGTGAGACGCAATCAATGAAGCAATTGTCTGGAGGACAGAAAACTGTTGTTGCCCTCACGTTGATTTTTGCTATTCAACGATGTGATCCTGCTCCTTTCTATCTTTTTGATGAGATTGATGCAGCATTGGATCCTCAGTACCGAACTGCTGTTGGAAATATGATTCGTCGTCTGGCAGACATGGCAAATACACAATTCATAACCACCACGTTTCGGCCAGAGCTCGTCAAAGTTGCTGATAAGATTTATGGGGTGACACATAGAAACAAGGTTAGCACTGTCGGAGTGATCTCCAGGGATGCTGCATTTGACTTTATTGAGAAAGATCAGTCTCACAATGCTGATTAA
Protein:  
MDLGNQTFSMHLQPEHRHALLHEGAGHQVLSAFVEIVFDNFDNRIPVDKEEVRLRRTIGFKKDDYYLDGKHITKTEVMNLLESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQETGNKRKQIIQVVQYLDERLKELDEEKEELRKYQQLDKQRKALEYTIYDKELQDARHKLEEVEEQRTKISEESAGMYNAVLDSHERFKEIEKMSKDLTKELQSLNKDKEALEMQQAKALKKQTALELDVKDLEEKMSGNMQARDDAVKQLRLLEKEIQDSTEERNQIKPKYDSQVKQEETITKGIMEREKQLSILYQKQGRATQFSSKAARDRWLDKEISDLKRVLQSNLIQIAANYYCIFQEQKLQEEIGRLHKDLEEQDASIEIHKTEIIELESSISQSRISSQKAERDKLQEERKSLWDKESKISAEIDKLKAELEKAEKSLDHATPGDVRRGLNSVRRICKEYKYGGVFGPIIELLSCDDKFFTSVEVTAGNSLFHVVVESDDVSTKIIRHLNSMKGGRVTFIPLNRVKAPHVTYPQSSDVIPLLRKLNFSPKFAPAFAQVFGRTVICRDIDVATRVARTDGLDCITLEGDQVSKKGGMTGGYYDPRRSRLKFMNIITQNSLAREEKEQELNRLTVTSSSVSGIWEKNLLDIEFSAISFLKLRNLPLVREIEVEHRTTLVDVKGSSRLEQKITALVTEQQQLDAKRVLDKSLLEQHKLDIANFNKQKQHISKALENKEKSLADVRTQIDQLKASMAMKEAEMGTELIDHLTPEEKDLLSRLNPEIADLKEQLIKCRSDRFEIETRKAELETNLTTNLKRRKQELEGMISAAEADASLDEADMKRQELRDAKLLVEDATQQLKRVCDAIDERTKQLKELKDEKNKLKDLEDNYERRLQDDAKGLEQLLSKRSNLLAKQEEYSKKIRELGPLSSDAFETYKRKHVKELLKMLHKCNEQLQKFSHVNKKALDQYINFTEQREELQRRQAELDAGDEKIKELIAVLDQRKDESIERTFKGVARHFREVFSELVQGGHGHLVMMKKKDGDHAADDDQDDDEPREADAEGRVEKYIGVKVKVSFTGQGETQSMKQLSGGQKTVVALTLIFAIQRCDPAPFYLFDEIDAALDPQYRTAVGNMIRRLADMANTQFITTTFRPELVKVADKIYGVTHRNKVSTVGVISRDAAFDFIEKDQSHNAD